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    sucla2 succinate-CoA ligase ADP-forming subunit beta [ Solea senegalensis (Senegalese sole) ]

    Gene ID: 122757972, updated on 22-Mar-2024

    Summary

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    Gene symbol
    sucla2
    Gene description
    succinate-CoA ligase ADP-forming subunit beta
    Locus tag
    JOB18_023109
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solea senegalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
    Orthologs
    human zebrafish all
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    Genomic context

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    See sucla2 in Genome Data Viewer
    Location:
    chromosome: LG2
    Exon count:
    7
    Annotation release Status Assembly LG Location
    100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (173142..178096)

    Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122757979 Neighboring gene integral membrane protein 2Ba Neighboring gene gastrula zinc finger protein XlCGF7.1-like Neighboring gene mediator complex subunit 4 Neighboring gene titin, tandem duplicate 2 Neighboring gene neurofilament heavy polypeptide-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate-CoA ligase (ADP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in succinyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of succinate-CoA ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
    Names
    succinate-CoA ligase ADP-forming subunit beta, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IFAPA_SoseM_1 Primary Assembly

    Genomic

    1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

      Range
      173142..178096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044011742.1 → XP_043867677.1  LOW QUALITY PROTEIN: succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial

      Conserved Domains (1) summary
      PLN00124
      Location:41 → 265
      PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional
    Nucleotide Protein
    Heading Accession and Version

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