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    HOOK3 hook microtubule tethering protein 3 [ Cervus elaphus (red deer) ]

    Gene ID: 122687834, updated on 22-Mar-2024

    Summary

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    Gene symbol
    HOOK3
    Gene description
    hook microtubule tethering protein 3
    See related
    EnsemblRapid:ENSCESG00005011195
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cervus elaphus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
    Orthologs
    human mouse all
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    Genomic context

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    See HOOK3 in Genome Data Viewer
    Location:
    chromosome: 32
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current mCerEla1.1 (GCF_910594005.1) 32 NC_057846.1 (44569354..44659644)

    Chromosome 32 - NC_057846.1Genomic Context describing neighboring genes Neighboring gene THAP domain containing 1 Neighboring gene ring finger protein 170 Neighboring gene farnesyltransferase, CAAX box, subunit alpha Neighboring gene protein O-mannose kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057846.1 Chromosome 32 Reference mCerEla1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton-dependent intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Hook homolog 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cervus elaphus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCerEla1.1

    Genomic

    1. NC_057846.1 Reference mCerEla1.1

      Range
      44569354..44659644
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043893518.1 → XP_043749453.1  protein Hook homolog 3 isoform X4

      Related
      ENSCESP00005014720.1, ENSCEST00005017415.1
      Conserved Domains (1) summary
      COG1196
      Location:306 → 657
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_043893519.1 → XP_043749454.1  protein Hook homolog 3 isoform X5

      Related
      ENSCESP00005014725.1, ENSCEST00005017421.1
      Conserved Domains (1) summary
      PRK03918
      Location:154 → 668
      PRK03918; DNA double-strand break repair ATPase Rad50

    3. XM_043893517.1 → XP_043749452.1  protein Hook homolog 3 isoform X3

      Conserved Domains (1) summary
      COG1196
      Location:319 → 670
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    4. XM_043893514.1 → XP_043749449.1  protein Hook homolog 3 isoform X1

      Conserved Domains (1) summary
      PRK03918
      Location:181 → 716
      PRK03918; DNA double-strand break repair ATPase Rad50

    5. XM_043893516.1 → XP_043749451.1  protein Hook homolog 3 isoform X2

      Conserved Domains (1) summary
      PRK03918
      Location:205 → 719
      PRK03918; DNA double-strand break repair ATPase Rad50
    Nucleotide Protein
    Heading Accession and Version

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