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    CMU_015340 26S proteasome subunit 4, putative [ Cryptosporidium muris RN66 ]

    Gene ID: 6996210, updated on 17-May-2024

    Summary

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    Gene symbol
    CMU_015340
    Gene description
    26S proteasome subunit 4, putative
    Locus tag
    CMU_015340
    See related
    CryptoDB:CMU_015340; VEuPathDB:CMU_015340
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cryptosporidium muris RN66 (strain: RN66)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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    Genomic context

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    See CMU_015340 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_002196574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene radical SAM domain-containing protein Neighboring gene yippee family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002196574.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    26S proteasome subunit 4, putative
    XP_002141206.1
    • encoded by transcript CMU_015340A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002196574.1 Reference assembly

      Range
      707504..708847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002141170.1 → XP_002141206.1  26S proteasome subunit 4, putative [Cryptosporidium muris RN66]

      See identical proteins and their annotated locations for XP_002141206.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6AEB1
      Conserved Domains (3) summary
      PTZ00361
      Location:1 → 447
      PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
      pfam00004
      Location:229 → 361
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam16450
      Location:135 → 183
      Prot_ATP_ID_OB; Proteasomal ATPase OB/ID domain
    Nucleotide Protein
    Heading Accession and Version

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