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    klhl42 kelch-like family, member 42 [ Chiloscyllium plagiosum (whitespotted bambooshark) ]

    Gene ID: 122559652, updated on 22-Mar-2024

    Summary

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    Gene symbol
    klhl42
    Gene description
    kelch-like family, member 42
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiloscyllium plagiosum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Chiloscyllium
    Orthologs
    human zebrafish all
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    Genomic context

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    See klhl42 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM401019v2 (GCF_004010195.1) 19 NC_057728.1 (30954374..30984513)

    Chromosome 19 - NC_057728.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, KQT-like subfamily, member 1.2 Neighboring gene MANSC domain-containing protein 4-like Neighboring gene mitochondrial ribosomal protein S35 Neighboring gene galanin receptor 2b Neighboring gene parathyroid hormone-related protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057728.1 Chromosome 19 Reference ASM401019v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kelch-like protein 42

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiloscyllium plagiosum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM401019v2 Primary Assembly

    Genomic

    1. NC_057728.1 Reference ASM401019v2 Primary Assembly

      Range
      30954374..30984513
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043709489.1 → XP_043565424.1  kelch-like protein 42

      Conserved Domains (4) summary
      PHA03098
      Location:12 → 451
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:207 → 250
      Kelch; KELCH repeat [structural motif]
      cd18478
      Location:98 → 200
      BACK_KLHL42_KLHDC5; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 42 (KLHL42)
      cl38908
      Location:4 → 86
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    2. XM_043709488.1 → XP_043565423.1  kelch-like protein 42

      Conserved Domains (4) summary
      PHA03098
      Location:12 → 451
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:207 → 250
      Kelch; KELCH repeat [structural motif]
      cd18478
      Location:98 → 200
      BACK_KLHL42_KLHDC5; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 42 (KLHL42)
      cl38908
      Location:4 → 86
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    3. XM_043709487.1 → XP_043565422.1  kelch-like protein 42

      Conserved Domains (4) summary
      PHA03098
      Location:12 → 451
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:207 → 250
      Kelch; KELCH repeat [structural motif]
      cd18478
      Location:98 → 200
      BACK_KLHL42_KLHDC5; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 42 (KLHL42)
      cl38908
      Location:4 → 86
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    4. XM_043709490.1 → XP_043565425.1  kelch-like protein 42

      Conserved Domains (4) summary
      PHA03098
      Location:12 → 451
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:207 → 250
      Kelch; KELCH repeat [structural motif]
      cd18478
      Location:98 → 200
      BACK_KLHL42_KLHDC5; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 42 (KLHL42)
      cl38908
      Location:4 → 86
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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