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    GPT glutamic--pyruvic transaminase [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119851249, updated on 8-May-2024

    Summary

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    Gene symbol
    GPT
    Gene description
    glutamic--pyruvic transaminase
    See related
    EnsemblRapid:ENSDCOG00030013432
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
    Orthologs
    human mouse all
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    Genomic context

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    See GPT in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 2 NC_050069.1 (3616065..3637911)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 2 NC_050069.1 (3622986..3637907)

    Chromosome 2 - NC_050069.1Genomic Context describing neighboring genes Neighboring gene forkhead box protein H1-like Neighboring gene protein phosphatase 1 regulatory subunit 16A Neighboring gene alanine aminotransferase 2-like Neighboring gene fucolectin-1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alanine aminotransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050069.1 Reference rDerCor1.pri.v4

      Range
      3616065..3637911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043509889.1 → XP_043365824.1  alanine aminotransferase 1 isoform X2

      Conserved Domains (1) summary
      PTZ00377
      Location:9 → 486
      PTZ00377; alanine aminotransferase; Provisional

    2. XM_038390799.2 → XP_038246727.1  alanine aminotransferase 1 isoform X2

      Conserved Domains (1) summary
      PTZ00377
      Location:9 → 486
      PTZ00377; alanine aminotransferase; Provisional

    3. XM_043509890.1 → XP_043365825.1  alanine aminotransferase 1 isoform X2

      Related
      ENSDCOP00030038617.1, ENSDCOT00030040967.1
      Conserved Domains (1) summary
      PTZ00377
      Location:9 → 486
      PTZ00377; alanine aminotransferase; Provisional

    4. XM_038390798.2 → XP_038246726.1  alanine aminotransferase 1 isoform X1

      Related
      ENSDCOP00030038753.1, ENSDCOT00030041102.1
      Conserved Domains (1) summary
      PTZ00377
      Location:64 → 541
      PTZ00377; alanine aminotransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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