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    neurod6a neuronal differentiation 6a [ Cyprinus carpio (common carp) ]

    Gene ID: 109103712, updated on 14-Mar-2024

    Summary

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    Gene symbol
    neurod6a
    Gene description
    neuronal differentiation 6a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinus carpio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
    Also known as
    neurod6
    Orthologs
    human zebrafish all
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    Genomic context

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    See neurod6a in Genome Data Viewer
    Location:
    chromosome: B24
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current ASM1834038v1 (GCF_018340385.1) B24 NC_056620.1 (19061887..19064899)
    100 previous assembly common carp genome (GCF_000951615.1) 1 NC_031697.1 (238460..241431, complement)

    Chromosome B24 - NC_056620.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109112583 Neighboring gene protein phosphatase 1 regulatory subunit 17 Neighboring gene eukaryotic translation initiation factor 1b Neighboring gene YME1-like 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurogenic differentiation factor 6-A
    Names
    neuronal differentiation 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834038v1 Primary Assembly

    Genomic

    1. NC_056620.1 Reference ASM1834038v1 Primary Assembly

      Range
      19061887..19064899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042752173.1 → XP_042608107.1  neurogenic differentiation factor 6-A isoform X2

      UniProtKB/TrEMBL
      A0A8C2EG83, A0A9J8D623, A0A9R0AR28
      Conserved Domains (2) summary
      cd19722
      Location:76 → 145
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:147 → 265
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    2. XM_042752172.1 → XP_042608106.1  neurogenic differentiation factor 6-A isoform X1

      UniProtKB/TrEMBL
      A0A8C2EG83, A0A9R0ATN4
      Conserved Domains (1) summary
      cd19722
      Location:93 → 162
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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