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    LOC121941892 oxysterol-binding protein 1-like [ Plectropomus leopardus (leopard coralgrouper) ]

    Gene ID: 121941892, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC121941892
    Gene description
    oxysterol-binding protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Plectropomus leopardus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Plectropomus
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    Genomic context

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    See LOC121941892 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current YSFRI_Pleo_2.0 (GCF_008729295.1) 4 NC_056466.1 (17214708..17225338, complement)

    Chromosome 4 - NC_056466.1Genomic Context describing neighboring genes Neighboring gene storkhead-box protein 2-like Neighboring gene caspase 3, apoptosis-related cysteine peptidase a Neighboring gene spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP Neighboring gene pericentriolar material 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056466.1 Chromosome 4 Reference YSFRI_Pleo_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxysterol-binding protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Plectropomus leopardus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference YSFRI_Pleo_2.0 Primary Assembly

    Genomic

    1. NC_056466.1 Reference YSFRI_Pleo_2.0 Primary Assembly

      Range
      17214708..17225338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042484862.1 → XP_042340796.1  oxysterol-binding protein 1-like isoform X7

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    2. XM_042484857.1 → XP_042340791.1  oxysterol-binding protein 1-like isoform X2

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    3. XM_042484863.1 → XP_042340797.1  oxysterol-binding protein 1-like isoform X8

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    4. XM_042484860.1 → XP_042340794.1  oxysterol-binding protein 1-like isoform X5

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    5. XM_042484858.1 → XP_042340792.1  oxysterol-binding protein 1-like isoform X3

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    6. XM_042484861.1 → XP_042340795.1  oxysterol-binding protein 1-like isoform X6

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    7. XM_042484859.1 → XP_042340793.1  oxysterol-binding protein 1-like isoform X4

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain

    8. XM_042484856.1 → XP_042340790.1  oxysterol-binding protein 1-like isoform X1

      Conserved Domains (1) summary
      cd13284
      Location:15 → 113
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain
    Nucleotide Protein
    Heading Accession and Version

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