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    UBXN6 UBX domain protein 6 [ Sceloporus undulatus (fence lizard) ]

    Gene ID: 121936970, updated on 22-Mar-2024

    Summary

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    Gene symbol
    UBXN6
    Gene description
    UBX domain protein 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sceloporus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
    Orthologs
    human mouse all
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    Genomic context

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    See UBXN6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current SceUnd_v1.1 (GCF_019175285.1) 7 NC_056528.1 (26385159..26399433)

    Chromosome 7 - NC_056528.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121936541 Neighboring gene HDGF like 2 Neighboring gene chromatin assembly factor 1 subunit A Neighboring gene SH3 domain containing GRB2 like 1, endophilin A2 Neighboring gene MPN domain containing

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056528.1 Chromosome 7 Reference SceUnd_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UBX domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SceUnd_v1.1

    Genomic

    1. NC_056528.1 Reference SceUnd_v1.1

      Range
      26385159..26399433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042479721.1 → XP_042335655.1  UBX domain-containing protein 6 isoform X2

      Conserved Domains (2) summary
      cd10460
      Location:158 → 264
      PUB_UBXD1; PNGase/UBA or UBX (PUB) domain of UBXD1
      cd16119
      Location:337 → 408
      UBX_UBXN6; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 6 (UBXN6) and similar proteins

    2. XM_042479720.1 → XP_042335654.1  UBX domain-containing protein 6 isoform X1

      Conserved Domains (2) summary
      cd10460
      Location:176 → 282
      PUB_UBXD1; PNGase/UBA or UBX (PUB) domain of UBXD1
      cd16119
      Location:355 → 426
      UBX_UBXN6; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 6 (UBXN6) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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