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    EN1 engrailed homeobox 1 [ Sceloporus undulatus (fence lizard) ]

    Gene ID: 121914202, updated on 22-Mar-2024

    Summary

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    Gene symbol
    EN1
    Gene description
    engrailed homeobox 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sceloporus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
    Orthologs
    human mouse all
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    Genomic context

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    See EN1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current SceUnd_v1.1 (GCF_019175285.1) 1 NC_056522.1 (236235255..236246177, complement)

    Chromosome 1 - NC_056522.1Genomic Context describing neighboring genes Neighboring gene insulin induced gene 2 Neighboring gene U1 spliceosomal RNA Neighboring gene macrophage receptor with collagenous structure Neighboring gene U1 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056522.1 Chromosome 1 Reference SceUnd_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein engrailed-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SceUnd_v1.1

    Genomic

    1. NC_056522.1 Reference SceUnd_v1.1

      Range
      236235255..236246177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042437530.1 → XP_042293464.1  homeobox protein engrailed-1 isoform X2

      Conserved Domains (1) summary
      smart00389
      Location:330 → 384
      HOX; Homeodomain

    2. XM_042437449.1 → XP_042293383.1  homeobox protein engrailed-1 isoform X1

      Conserved Domains (1) summary
      smart00389
      Location:331 → 385
      HOX; Homeodomain
    Nucleotide Protein
    Heading Accession and Version

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