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    prim1 DNA primase subunit 1 [ Melanotaenia boesemani (Boeseman's rainbowfish) ]

    Gene ID: 121651723, updated on 11-Apr-2024

    Summary

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    Gene symbol
    prim1
    Gene description
    DNA primase subunit 1
    See related
    EnsemblRapid:ENSMBOG00000024212
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Melanotaenia boesemani
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Atheriniformes; Melanotaeniidae; Melanotaenia
    Orthologs
    human zebrafish all
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    Genomic context

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    See prim1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current fMelBoe1.pri (GCF_017639745.1) 13 NC_055694.1 (9655277..9661972)

    Chromosome 13 - NC_055694.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 Neighboring gene rho-related GTP-binding protein Rho6-like Neighboring gene nascent polypeptide associated complex subunit alpha Neighboring gene small nucleolar RNA SNORD59 Neighboring gene small nucleolar RNA SNORD59

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_055694.1 Chromosome 13 Reference fMelBoe1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA primase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication, synthesis of primer IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of alpha DNA polymerase:primase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA primase small subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Melanotaenia boesemani Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMelBoe1.pri Primary Assembly

    Genomic

    1. NC_055694.1 Reference fMelBoe1.pri Primary Assembly

      Range
      9655277..9661972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042004125.1 → XP_041860059.1  DNA primase small subunit

      Related
      ENSMBOP00000056821.1, ENSMBOT00000058129.1
      Conserved Domains (1) summary
      cd04860
      Location:24 → 343
      AE_Prim_S; primase domain similar to that found in the small subunit of archaeal and eukaryotic (A/E) DNA primases. Primases are DNA-dependent RNA polymerases which synthesis the short RNA primers required for DNA replication. In addition to its catalytic role in ...
    Nucleotide Protein
    Heading Accession and Version

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