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    NGFR nerve growth factor receptor [ Vulpes lagopus (Arctic fox) ]

    Gene ID: 121473983, updated on 22-Mar-2024

    Summary

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    Gene symbol
    NGFR
    Gene description
    nerve growth factor receptor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes lagopus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
    Orthologs
    human mouse all
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    Genomic context

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    See NGFR in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM1834538v1 (GCF_018345385.1) 12 NC_054835.1 (35835036..35857332, complement)

    Chromosome 12 - NC_054835.1Genomic Context describing neighboring genes Neighboring gene speckle type BTB/POZ protein Neighboring gene neurexophilin 3 Neighboring gene prohibitin 1 Neighboring gene uncharacterized LOC121473716

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054835.1 Chromosome 12 Reference ASM1834538v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables coreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables death receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nerve growth factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834538v1 Primary Assembly

    Genomic

    1. NC_054835.1 Reference ASM1834538v1 Primary Assembly

      Range
      35835036..35857332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041726814.1 → XP_041582748.1  tumor necrosis factor receptor superfamily member 16

      Conserved Domains (2) summary
      cd08311
      Location:482 → 560
      Death_p75NR; Death domain of p75 Neurotrophin Receptor
      cd13416
      Location:172 → 330
      TNFRSF16; Tumor necrosis factor receptor superfamily member 16 (TNFRSF16), also known as p75 neurotrophin receptor (p75NTR) or CD271
    Nucleotide Protein Strain
    Heading Accession and Version

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