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    PARD6B par-6 family cell polarity regulator beta [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100221634, updated on 13-Aug-2024

    Summary

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    Gene symbol
    PARD6B
    Gene description
    par-6 family cell polarity regulator beta
    See related
    Ensembl:ENSTGUG00000021704 Ensembl:ENSTGUG00000026980
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs
    human mouse all
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    Genomic context

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    See PARD6B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 20 NC_044232.2 (13818205..13834281, complement)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 20 NC_045018.1 (14064202..14080219, complement)

    Chromosome 20 - NC_044232.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116809168 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 1, catalytic Neighboring gene activity dependent neuroprotector homeobox Neighboring gene uncharacterized LOC121470958 Neighboring gene uncharacterized LOC115497886

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase C binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in centrosome cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cellular localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    partitioning defective 6 homolog beta
    Names
    par-6 partitioning defective 6 homolog beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_044232.2 Reference bTaeGut1.4.pri Primary Assembly

      Range
      13818205..13834281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030288599.3 → XP_030144459.3  partitioning defective 6 homolog beta

      UniProtKB/TrEMBL
      A0A674GU84, A0A674H0C0
      Conserved Domains (2) summary
      cd06403
      Location:17 → 96
      PB1_Par6; The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions ...
      cd00992
      Location:156 → 247
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    Nucleotide Protein
    Heading Accession and Version

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