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    LARP7 La ribonucleoprotein 7, transcriptional regulator [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

    Gene ID: 121349166, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LARP7
    Gene description
    La ribonucleoprotein 7, transcriptional regulator
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pyrgilauda ruficollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
    Orthologs
    human mouse all
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    Genomic context

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    See LARP7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024511877.1 (241818..264056)

    NW_024511877.1Genomic Context describing neighboring genes Neighboring gene neurogenin 2 Neighboring gene zinc finger GRF-type containing 1 Neighboring gene ankyrin 2 Neighboring gene calcium/calmodulin dependent protein kinase II delta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024511877 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    la-related protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1759013v1 Primary Assembly

    Genomic

    1. NW_024511877.1 Reference ASM1759013v1 Primary Assembly

      Range
      241818..264056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041459347.1 → XP_041315281.1  la-related protein 7 isoform X1

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      PTZ00449
      Location:192 → 360
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart00360
      Location:128 → 190
      RRM; RNA recognition motif

    2. XM_041459346.1 → XP_041315280.1  la-related protein 7 isoform X1

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      PTZ00449
      Location:192 → 360
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart00360
      Location:128 → 190
      RRM; RNA recognition motif

    3. XM_041459349.1 → XP_041315283.1  la-related protein 7 isoform X3

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      PTZ00449
      Location:176 → 359
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart00360
      Location:128 → 190
      RRM; RNA recognition motif

    4. XM_041459348.1 → XP_041315282.1  la-related protein 7 isoform X2

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      PTZ00449
      Location:192 → 360
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart00360
      Location:128 → 190
      RRM; RNA recognition motif
    Nucleotide Protein
    Heading Accession and Version

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