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    LOC121328558 E3 ubiquitin-protein ligase UBR4-like [ Polyodon spathula (Mississippi paddlefish) ]

    Gene ID: 121328558, updated on 7-Dec-2023

    Summary

    Gene symbol
    LOC121328558
    Gene description
    E3 ubiquitin-protein ligase UBR4-like
    See related
    EnsemblRapid:ENSPAHG00005011926
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polyodon spathula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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    Genomic context

    See LOC121328558 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    108
    Annotation release Status Assembly Chr Location
    100 current ASM1765450v1 (GCF_017654505.1) 16 NC_054549.1 (10647762..10697146, complement)

    Chromosome 16 - NC_054549.1Genomic Context describing neighboring genes Neighboring gene delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like Neighboring gene intermediate filament family orphan 2-like Neighboring gene ER membrane protein complex subunit 1-like Neighboring gene mRNA turnover protein 4 homolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_054549.1 Chromosome 16 Reference ASM1765450v1 Primary Assembly

    General protein information

    Preferred Names
    E3 ubiquitin-protein ligase UBR4-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1765450v1 Primary Assembly

    Genomic

    1. NC_054549.1 Reference ASM1765450v1 Primary Assembly

      Range
      10647762..10697146 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041273289.1XP_041129223.1  E3 ubiquitin-protein ligase UBR4-like isoform X1

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    2. XM_041273300.1XP_041129234.1  E3 ubiquitin-protein ligase UBR4-like isoform X12

      Related
      ENSPAHP00005018167.1, ENSPAHT00005019344.1
      Conserved Domains (1) summary
      smart00396
      Location:16401707
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    3. XM_041273299.1XP_041129233.1  E3 ubiquitin-protein ligase UBR4-like isoform X11

      Conserved Domains (1) summary
      smart00396
      Location:16401707
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    4. XM_041273291.1XP_041129225.1  E3 ubiquitin-protein ligase UBR4-like isoform X3

      Conserved Domains (1) summary
      smart00396
      Location:16401707
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    5. XM_041273298.1XP_041129232.1  E3 ubiquitin-protein ligase UBR4-like isoform X10

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    6. XM_041273297.1XP_041129231.1  E3 ubiquitin-protein ligase UBR4-like isoform X9

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    7. XM_041273296.1XP_041129230.1  E3 ubiquitin-protein ligase UBR4-like isoform X8

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    8. XM_041273295.1XP_041129229.1  E3 ubiquitin-protein ligase UBR4-like isoform X7

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    9. XM_041273294.1XP_041129228.1  E3 ubiquitin-protein ligase UBR4-like isoform X6

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    10. XM_041273293.1XP_041129227.1  E3 ubiquitin-protein ligase UBR4-like isoform X5

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    11. XM_041273292.1XP_041129226.1  E3 ubiquitin-protein ligase UBR4-like isoform X4

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    12. XM_041273290.1XP_041129224.1  E3 ubiquitin-protein ligase UBR4-like isoform X2

      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    13. XM_041273288.1XP_041129222.1  E3 ubiquitin-protein ligase UBR4-like isoform X1

      Related
      ENSPAHP00005018055.1, ENSPAHT00005019232.1
      Conserved Domains (1) summary
      smart00396
      Location:16421709
      ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway