U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    HOOK3 hook microtubule tethering protein 3 [ Cygnus olor (mute swan) ]

    Gene ID: 121062305, updated on 22-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    HOOK3
    Gene description
    hook microtubule tethering protein 3
    See related
    EnsemblRapid:ENSCOLG00015008187
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cygnus olor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HOOK3 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    100 current bCygOlo1.pri.v2 (GCF_009769625.2) Z NC_049198.1 (51327280..51415876, complement)

    Chromosome Z - NC_049198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121062304 Neighboring gene E3 ubiquitin-protein ligase KCMF1 Neighboring gene ring finger protein 170 Neighboring gene transcription factor jun-D-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_049198.1 Chromosome Z Reference bCygOlo1.pri.v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton-dependent intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein Hook homolog 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cygnus olor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCygOlo1.pri.v2 Primary Assembly

    Genomic

    1. NC_049198.1 Reference bCygOlo1.pri.v2 Primary Assembly

      Range
      51327280..51415876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040542137.1 → XP_040398071.1  protein Hook homolog 3 isoform X2

      Related
      ENSCOLP00015013898.1, ENSCOLT00015014954.1
      Conserved Domains (2) summary
      pfam05622
      Location:184 → 709
      HOOK; HOOK protein
      cl41774
      Location:8 → 160
      HkD_SF; Hook domain-containing proteins superfamily

    2. XM_040542136.1 → XP_040398070.1  protein Hook homolog 3 isoform X1

      Conserved Domains (2) summary
      pfam05622
      Location:184 → 711
      HOOK; HOOK protein
      cl41774
      Location:8 → 160
      HkD_SF; Hook domain-containing proteins superfamily

    3. XM_040542138.1 → XP_040398072.1  protein Hook homolog 3 isoform X3

      Conserved Domains (2) summary
      TIGR02168
      Location:274 → 593
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:139 → 373
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    4. XM_040542139.1 → XP_040398073.1  protein Hook homolog 3 isoform X4

      Related
      ENSCOLP00015013833.1, ENSCOLT00015014888.1
      Conserved Domains (2) summary
      pfam05622
      Location:184 → 709
      HOOK; HOOK protein
      cl41774
      Location:8 → 160
      HkD_SF; Hook domain-containing proteins superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.