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    Trypsin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818082, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Trypsin family protein
    Primary source
    TAIR:AT2G35155
    Locus tag
    AT2G35155
    See related
    Araport:AT2G35155
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (14818966..14822022, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DCD (Development and Cell Death) domain protein Neighboring gene EXORDIUM like 7 Neighboring gene SU(VAR)3-9 homolog 5 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001336546.1
    NM_129069.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Trypsin family protein
    NP_565798.1
    • Trypsin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT5G45030.2); Has 136 Blast hits to 136 proteins in 33 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14818966..14822022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129069.3 → NP_565798.1  Trypsin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VU92, A0A384LA00, Q8S8Q2, Q93YT5

    2. NM_001336546.1 → NP_001323461.1  Trypsin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VU92, A0A384LA00, Q8S8Q2, Q93YT5
    Nucleotide Protein
    Heading Accession and Version

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