U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TRAPPC3 trafficking protein particle complex subunit 3 [ Hirundo rustica (Barn swallow) ]

    Gene ID: 120763218, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TRAPPC3
    Gene description
    trafficking protein particle complex subunit 3
    See related
    EnsemblRapid:ENSHRRG00010010236
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hirundo rustica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRAPPC3 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 25 NC_053474.1 (2015786..2021235)

    Chromosome 25 - NC_053474.1Genomic Context describing neighboring genes Neighboring gene MAP7 domain containing 1 Neighboring gene uncharacterized LOC120763000 Neighboring gene collagen type VIII alpha 2 chain Neighboring gene ADP-ribosylserine hydrolase Neighboring gene tektin 2 Neighboring gene argonaute RISC catalytic component 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_053474.1 Chromosome 25 Reference bHirRus1.pri.v3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trafficking protein particle complex subunit 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bHirRus1.pri.v3

    Genomic

    1. NC_053474.1 Reference bHirRus1.pri.v3

      Range
      2015786..2021235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040086375.1 → XP_039942309.1  trafficking protein particle complex subunit 3 isoform X2

      UniProtKB/TrEMBL
      A0A3M0ITS8, A0A7L4EAX8
      Related
      ENSHRRP00010013889.1, ENSHRRT00010014740.2
      Conserved Domains (1) summary
      cd14942
      Location:15 → 169
      TRAPPC3_bet3; Bet3-TRAPPC3 subunit of the TRAPP complex

    2. XM_040086374.2 → XP_039942308.1  trafficking protein particle complex subunit 3 isoform X1

      UniProtKB/TrEMBL
      A0A7L4EAX8
      Related
      ENSHRRP00010013877.2, ENSHRRT00010014728.2
      Conserved Domains (1) summary
      cd14942
      Location:31 → 185
      TRAPPC3_bet3; Bet3-TRAPPC3 subunit of the TRAPP complex
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.