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    TDRD3 tudor domain containing 3 [ Pteropus giganteus (Indian flying fox) ]

    Gene ID: 120614356, updated on 30-Mar-2024

    Summary

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    Gene symbol
    TDRD3
    Gene description
    tudor domain containing 3
    See related
    EnsemblRapid:ENSPGIG00000009663
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pteropus giganteus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
    Orthologs
    human mouse all
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    Genomic context

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    See TDRD3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024347788.1 (995917..1130537, complement)

    NW_024347788.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC120614357

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024347788 Unplaced Scaffold Reference Ma_sr-lr_union100

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tudor domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ma_sr-lr_union100

    Genomic

    1. NW_024347788.1 Reference Ma_sr-lr_union100

      Range
      995917..1130537 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039877168.1 → XP_039733102.1  tudor domain-containing protein 3 isoform X5

      Conserved Domains (3) summary
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:1 → 72
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:556 → 608
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    2. XM_039877163.1 → XP_039733097.1  tudor domain-containing protein 3 isoform X2

      Related
      ENSPGIP00000007977.1, ENSPGIT00000012524.1
      Conserved Domains (3) summary
      cd14282
      Location:287 → 325
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:15 → 165
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:649 → 701
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    3. XM_039877162.1 → XP_039733096.1  tudor domain-containing protein 3 isoform X1

      Related
      ENSPGIP00000007994.1, ENSPGIT00000012549.1
      Conserved Domains (2) summary
      smart00333
      Location:649 → 700
      TUDOR; Tudor domain
      cd14282
      Location:287 → 325
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins

    4. XM_039877165.1 → XP_039733099.1  tudor domain-containing protein 3 isoform X4

      Conserved Domains (2) summary
      smart00333
      Location:556 → 607
      TUDOR; Tudor domain
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins

    5. XM_039877166.1 → XP_039733100.1  tudor domain-containing protein 3 isoform X4

      Conserved Domains (2) summary
      smart00333
      Location:556 → 607
      TUDOR; Tudor domain
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins

    6. XM_039877164.1 → XP_039733098.1  tudor domain-containing protein 3 isoform X3

      Conserved Domains (2) summary
      smart00333
      Location:649 → 700
      TUDOR; Tudor domain
      cd14282
      Location:287 → 325
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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