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    nt5e 5'-nucleotidase, ecto (CD73) [ Polypterus senegalus (gray bichir) ]

    Gene ID: 120525619, updated on 8-May-2024

    Summary

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    Gene symbol
    nt5e
    Gene description
    5'-nucleotidase, ecto (CD73)
    Locus tag
    GTO96_0015053
    See related
    EnsemblRapid:ENSSTSG00000000696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polypterus senegalus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
    Also known as
    V5ntd
    Orthologs
    human zebrafish all
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    Genomic context

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    See nt5e in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM1683550v1 (GCF_016835505.1) 3 NC_053156.1 (151353909..151443974)

    Chromosome 3 - NC_053156.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120526825 Neighboring gene uncharacterized LOC120526826 Neighboring gene sorting nexin 14 Neighboring gene synaptotagmin binding, cytoplasmic RNA interacting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053156.1 Chromosome 3 Reference ASM1683550v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-nucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in AMP catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-nucleotidase
    Names
    V5NTD nucleotidase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1683550v1 Primary Assembly

    Genomic

    1. NC_053156.1 Reference ASM1683550v1 Primary Assembly

      Range
      151353909..151443974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039748067.1 → XP_039604001.1  5'-nucleotidase

      UniProtKB/TrEMBL
      A0A8X7XI38
      Related
      ENSSTSP00000001624.1, ENSSTST00000001920.1
      Conserved Domains (1) summary
      cd07409
      Location:34 → 314
      MPP_CD73_N; CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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