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    LOC120450566 AF4/FMR2 family member lilli [ Drosophila santomea ]

    Gene ID: 120450566, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC120450566
    Gene description
    AF4/FMR2 family member lilli
    See related
    EnsemblRapid:LOC120450566
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila santomea
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC120450566 in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Prin_Dsan_1.1 (GCF_016746245.2) 3L NC_053018.2 (15437849..15456769)
    100 previous assembly Prin_Dsan_1.0 (GCF_016746245.1) 3L NC_053018.1 (15437390..15455632)

    Chromosome 3L - NC_053018.2Genomic Context describing neighboring genes Neighboring gene catalase Neighboring gene uncharacterized LOC120450567 Neighboring gene ftz transcription factor 1 Neighboring gene Autophagy-related protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AF4/FMR2 family member lilli

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila santomea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dsan_1.1

    Genomic

    1. NC_053018.2 Reference Prin_Dsan_1.1

      Range
      15437849..15456769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039633676.2 → XP_039489610.1  AF4/FMR2 family member lilli

      Related
      XP_039489610.1, XM_039633676.2
      Conserved Domains (4) summary
      COG0666
      Location:1728 → 1834
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      PRK07764
      Location:412 → 601
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd14259
      Location:2043 → 2156
      PUFD_like; PCGF Ub-like fold discriminator and related domains
      sd00045
      Location:1726 → 1757
      ANK; ANK repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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