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    KLF11 KLF transcription factor 11 [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120401744, updated on 21-Mar-2024

    Summary

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    Gene symbol
    KLF11
    Gene description
    KLF transcription factor 11
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    See KLF11 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly LG Location
    100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (178972485..178986245)

    Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit B Neighboring gene grainyhead like transcription factor 1 Neighboring gene cystin 1 Neighboring gene ribonucleotide reductase regulatory subunit M2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Krueppel-like factor 11
    Names
    Kruppel like factor 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

      Range
      178972485..178986245
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039531945.1 → XP_039387879.1  Krueppel-like factor 11 isoform X1

      Conserved Domains (4) summary
      COG5048
      Location:404 → 460
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:410 → 429
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:465 → 487
      zf-C2H2; Zinc finger, C2H2 type
      cd21584
      Location:37 → 405
      KLF11_N; N-terminal domain of Kruppel-like factor 11

    2. XM_039531947.1 → XP_039387881.1  Krueppel-like factor 11 isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:314 → 336
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:342 → 364
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:328 → 351
      zf-H2C2_2; Zinc-finger double domain
      cl41731
      Location:37 → 199
      KLF10_11_N; N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins

    3. XM_039531948.1 → XP_039387882.1  Krueppel-like factor 11 isoform X4

      Conserved Domains (1) summary
      cl41731
      Location:37 → 199
      KLF10_11_N; N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins

    4. XM_039531946.1 → XP_039387880.1  Krueppel-like factor 11 isoform X2

      Conserved Domains (4) summary
      COG5048
      Location:354 → 410
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:360 → 379
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:415 → 437
      zf-C2H2; Zinc finger, C2H2 type
      cd21584
      Location:1 → 355
      KLF11_N; N-terminal domain of Kruppel-like factor 11

    RNA

    1. XR_005596696.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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