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    PNO1 partner of NOB1 homolog [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120400215, updated on 21-Mar-2024

    Summary

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    Gene symbol
    PNO1
    Gene description
    partner of NOB1 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    See PNO1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly LG Location
    100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (18332597..18342503)

    Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120401689 Neighboring gene uncharacterized LOC120401690 Neighboring gene uncharacterized LOC120402065 Neighboring gene C1D nuclear receptor corepressor Neighboring gene dynein axonemal assembly factor 10 Neighboring gene cannabinoid receptor interacting protein 1 Neighboring gene pleckstrin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein PNO1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

      Range
      18332597..18342503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039528632.1 → XP_039384566.1  RNA-binding protein PNO1

      Conserved Domains (2) summary
      cd22391
      Location:79 → 158
      KH-I_PNO1_rpt1; first type I K homology (KH) RNA-binding domain found in partner of NOB1 (PNO1) and similar proteins
      cd22392
      Location:160 → 255
      KH-I_PNO1_rpt2; second type I K homology (KH) RNA-binding domain found in partner of NOB1 (PNO1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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