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    HSDL2 hydroxysteroid dehydrogenase like 2 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

    Gene ID: 101028909, updated on 18-Nov-2024

    Summary

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    Gene symbol
    HSDL2
    Gene description
    hydroxysteroid dehydrogenase like 2
    See related
    EnsemblRapid:ENSSBOG00000033588
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saimiri boliviensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
    Orthologs
    human mouse all
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    Genomic context

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    See HSDL2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100928.1 (35589565..35677937, complement)
    101 previous assembly SaiBol1.0 (GCF_000235385.1) Unplaced Scaffold NW_003943617.1 (9844361..9920440, complement)

    NW_024100928.1Genomic Context describing neighboring genes Neighboring gene KIAA1958 ortholog Neighboring gene 40S ribosomal protein S27-like Neighboring gene eukaryotic translation initiation factor 2 subunit 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene polypyrimidine tract binding protein 3 Neighboring gene U6 spliceosomal RNA Neighboring gene sushi domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hydroxysteroid dehydrogenase-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCM_Sbol_2.0 Primary Assembly

    Genomic

    1. NW_024100928.1 Reference BCM_Sbol_2.0 Primary Assembly

      Range
      35589565..35677937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039475122.1 → XP_039331056.1  hydroxysteroid dehydrogenase-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2K6USG3
      Related
      ENSSBOP00000034860.2, ENSSBOT00000051785.2
      Conserved Domains (2) summary
      cd09762
      Location:8 → 248
      HSDL2_SDR_c; human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs
      pfam02036
      Location:319 → 410
      SCP2; SCP-2 sterol transfer family

    2. XM_039475123.1 → XP_039331057.1  hydroxysteroid dehydrogenase-like protein 2 isoform X3

      Conserved Domains (2) summary
      pfam02036
      Location:202 → 293
      SCP2; SCP-2 sterol transfer family
      cl21454
      Location:2 → 131
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    3. XM_039475121.1 → XP_039331055.1  hydroxysteroid dehydrogenase-like protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A2K6USG3
      Conserved Domains (2) summary
      cd09762
      Location:8 → 248
      HSDL2_SDR_c; human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs
      pfam02036
      Location:319 → 398
      SCP2; SCP-2 sterol transfer family
    Nucleotide Protein
    Heading Accession and Version

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