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    Y50D7A.8 PDZ domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175194, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y50D7A.8
    Official Full Name
    PDZ domain-containing protein
    Primary source
    WormBase:WBGene00021756
    Locus tag
    CELE_Y50D7A.8
    See related
    AllianceGenome:WB:WBGene00021756
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in head; intestine; and pharynx. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y50D7A.8 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    8
    Sequence:
    Chromosome: III; NC_003281.10 (333618..343241, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene DUF295 domain-containing protein;F-box domain-containing protein Neighboring gene ncRNA Neighboring gene Alkyldihydroxyacetonephosphate synthase Neighboring gene ADF-H domain-containing protein Neighboring gene BZIP domain-containing protein Neighboring gene ncRNA Neighboring gene Phosphoinositide phospholipase C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    PDZ domain-containing protein
    NP_001370839.1
    • Confirmed by transcript evidence
    NP_001379297.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      333618..343241 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001384003.2 → NP_001370839.1  PDZ domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N3K5
      Conserved Domains (1) summary
      PTZ00121
      Location:568 → 678
      PTZ00121; MAEBL; Provisional

    2. NM_001393252.1 → NP_001379297.1  PDZ domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A6V7QZF0
      Conserved Domains (1) summary
      PTZ00121
      Location:505 → 615
      PTZ00121; MAEBL; Provisional
    Nucleotide Protein
    Heading Accession and Version

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