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    EAF02_004552 uncharacterized protein [ Botrytis sinoallii ]

    Gene ID: 62173675, updated on 7-Dec-2023

    Summary

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    Gene symbol
    EAF02_004552
    Gene description
    uncharacterized protein
    Locus tag
    EAF02_004552
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Botrytis sinoallii (strain: Bc 23, nat-host: Allium, type-material: culture from holotype of Botrytis sinoallii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
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    Genomic context

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    See EAF02_004552 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_024066034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024066034.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in early endosome to late endosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in tubular endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_024066034.1 Reference assembly

      Range
      190508..195121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038900600.1 → XP_038759112.1  uncharacterized protein EAF02_004552 [Botrytis sinoallii]

      Status: PROVISIONAL

      Conserved Domains (5) summary
      cd06093
      Location:943 → 1025
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
      sd00045
      Location:772 → 817
      ANK; ANK repeat [structural motif]
      cl19569
      Location:390 → 505
      VPS9; Vacuolar sorting protein 9 (VPS9) domain
      pfam13857
      Location:836 → 892
      Ank_5; Ankyrin repeats (many copies)
      cl39094
      Location:658 → 721
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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