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    LOC119852321 flap endonuclease 1-like [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119852321, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC119852321
    Gene description
    flap endonuclease 1-like
    See related
    EnsemblRapid:ENSDCOG00030013415
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
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    Genomic context

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    See LOC119852321 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 2 NC_050069.1 (3433125..3443667)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 2 NC_050069.1 (3434739..3443686)

    Chromosome 2 - NC_050069.1Genomic Context describing neighboring genes Neighboring gene zinc finger TRAF-type containing 1 Neighboring gene ras-related protein Rab-26-like Neighboring gene kinesin family member C2 Neighboring gene forkhead box H1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 5'-flap endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA-DNA hybrid ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    flap endonuclease 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050069.1 Reference rDerCor1.pri.v4

      Range
      3433125..3443667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043509878.1 → XP_043365813.1  flap endonuclease 1-like isoform X1

      Conserved Domains (1) summary
      PTZ00217
      Location:48 → 413
      PTZ00217; flap endonuclease-1; Provisional

    2. XM_038393543.2 → XP_038249471.1  flap endonuclease 1-like isoform X2

      Related
      ENSDCOP00030037540.1, ENSDCOT00030039819.1
      Conserved Domains (1) summary
      PTZ00217
      Location:1 → 366
      PTZ00217; flap endonuclease-1; Provisional
    Nucleotide Protein
    Heading Accession and Version

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