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    L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119849907, updated on 8-May-2024

    Summary

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    Gene symbol
    L3MBTL2
    Gene description
    L3MBTL histone methyl-lysine binding protein 2
    See related
    EnsemblRapid:ENSDCOG00030011809
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
    Orthologs
    human mouse all
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    Genomic context

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    See L3MBTL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 1 NC_050068.2 (261452020..261476264)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 1 NC_050068.1 (261478142..261502314)

    Chromosome 1 - NC_050068.2Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase p300 Neighboring gene uncharacterized LOC122457417 Neighboring gene histone acetyltransferase p300-like Neighboring gene chondroadherin-like Neighboring gene chondroadherin like Neighboring gene Ran GTPase activating protein 1 Neighboring gene serine/arginine repetitive matrix protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050068.2 Reference rDerCor1.pri.v4

      Range
      261452020..261476264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038387285.2 → XP_038243213.1  lethal(3)malignant brain tumor-like protein 2 isoform X2

      Related
      ENSDCOP00030034046.1, ENSDCOT00030035806.1
      Conserved Domains (2) summary
      smart00561
      Location:524 → 616
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:445 → 516
      MBT; mbt repeat

    2. XM_038387286.2 → XP_038243214.1  lethal(3)malignant brain tumor-like protein 2 isoform X3

      Related
      ENSDCOP00030034035.1, ENSDCOT00030035795.1
      Conserved Domains (2) summary
      smart00561
      Location:504 → 596
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:425 → 496
      MBT; mbt repeat

    3. XM_038387283.2 → XP_038243211.1  lethal(3)malignant brain tumor-like protein 2 isoform X1

      Conserved Domains (2) summary
      smart00561
      Location:526 → 618
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:447 → 518
      MBT; mbt repeat
    Nucleotide Protein
    Heading Accession and Version

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