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    LOC119774037 protein kinase C-binding protein 1-like [ Cyprinodon tularosa ]

    Gene ID: 119774037, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC119774037
    Gene description
    protein kinase C-binding protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinodon tularosa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
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    Genomic context

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    See LOC119774037 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current ASM1607723v1 (GCF_016077235.1) Unplaced Scaffold NW_024039562.1 (3950665..3978454)

    NW_024039562.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119774079 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene uncharacterized LOC119774111 Neighboring gene uncharacterized LOC119774085 Neighboring gene collagen, type IX, alpha 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024039562 Unplaced Scaffold Reference ASM1607723v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein kinase C-binding protein 1-like

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cyprinodon tularosa Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1607723v1

    Genomic

    1. NW_024039562.1 Reference ASM1607723v1

      Range
      3950665..3978454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038271313.1 → XP_038127241.1  protein kinase C-binding protein 1-like isoform X1

      Conserved Domains (7) summary
      cd05841
      Location:308 → 388
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:190 → 288
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:14 → 172
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:129 → 169
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1072 → 1106
      zf-MYND; MYND finger
      pfam07798
      Location:977 → 1068
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:457 → 654
      DUF3544; Domain of unknown function (DUF3544)

    2. XM_038271317.1 → XP_038127245.1  protein kinase C-binding protein 1-like isoform X2

      Conserved Domains (7) summary
      cd05841
      Location:308 → 388
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:190 → 288
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:14 → 172
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:129 → 169
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1064 → 1098
      zf-MYND; MYND finger
      pfam07798
      Location:969 → 1060
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:457 → 654
      DUF3544; Domain of unknown function (DUF3544)

    3. XM_038271320.1 → XP_038127248.1  protein kinase C-binding protein 1-like isoform X5

      Conserved Domains (7) summary
      cd05841
      Location:282 → 362
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:164 → 262
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:18 → 146
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:103 → 143
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1046 → 1080
      zf-MYND; MYND finger
      pfam07798
      Location:951 → 1042
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:431 → 628
      DUF3544; Domain of unknown function (DUF3544)

    4. XM_038271325.1 → XP_038127253.1  protein kinase C-binding protein 1-like isoform X8

      Conserved Domains (4) summary
      cd05841
      Location:234 → 314
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:116 → 214
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      pfam01753
      Location:998 → 1032
      zf-MYND; MYND finger
      pfam12064
      Location:383 → 580
      DUF3544; Domain of unknown function (DUF3544)

    5. XM_038271318.1 → XP_038127246.1  protein kinase C-binding protein 1-like isoform X3

      Conserved Domains (7) summary
      cd05841
      Location:295 → 375
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:177 → 275
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:3 → 159
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:116 → 156
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1059 → 1093
      zf-MYND; MYND finger
      pfam07798
      Location:964 → 1055
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:444 → 641
      DUF3544; Domain of unknown function (DUF3544)

    6. XM_038271319.1 → XP_038127247.1  protein kinase C-binding protein 1-like isoform X4

      Conserved Domains (7) summary
      cd05841
      Location:295 → 375
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:177 → 275
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:3 → 159
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:116 → 156
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1051 → 1085
      zf-MYND; MYND finger
      pfam07798
      Location:956 → 1047
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:444 → 641
      DUF3544; Domain of unknown function (DUF3544)

    7. XM_038271324.1 → XP_038127252.1  protein kinase C-binding protein 1-like isoform X7

      Conserved Domains (6) summary
      cd05841
      Location:269 → 349
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:151 → 249
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:3 → 133
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:90 → 130
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1033 → 1067
      zf-MYND; MYND finger
      pfam12064
      Location:418 → 615
      DUF3544; Domain of unknown function (DUF3544)

    8. XM_038271328.1 → XP_038127256.1  protein kinase C-binding protein 1-like isoform X10

      Conserved Domains (6) summary
      cd05841
      Location:269 → 349
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:151 → 249
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:3 → 133
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:90 → 130
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1025 → 1059
      zf-MYND; MYND finger
      pfam12064
      Location:418 → 615
      DUF3544; Domain of unknown function (DUF3544)

    9. XM_038271326.1 → XP_038127254.1  protein kinase C-binding protein 1-like isoform X9

      Conserved Domains (4) summary
      cd05841
      Location:221 → 301
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:103 → 201
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      pfam01753
      Location:985 → 1019
      zf-MYND; MYND finger
      pfam12064
      Location:370 → 567
      DUF3544; Domain of unknown function (DUF3544)

    10. XM_038271322.1 → XP_038127250.1  protein kinase C-binding protein 1-like isoform X6

      Conserved Domains (7) summary
      cd05841
      Location:275 → 355
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:157 → 255
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:7 → 139
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:96 → 136
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1039 → 1073
      zf-MYND; MYND finger
      pfam07798
      Location:944 → 1035
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:424 → 621
      DUF3544; Domain of unknown function (DUF3544)

    11. XM_038271323.1 → XP_038127251.1  protein kinase C-binding protein 1-like isoform X6

      Conserved Domains (7) summary
      cd05841
      Location:275 → 355
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:157 → 255
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:7 → 139
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:96 → 136
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1039 → 1073
      zf-MYND; MYND finger
      pfam07798
      Location:944 → 1035
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:424 → 621
      DUF3544; Domain of unknown function (DUF3544)

    12. XM_038271321.1 → XP_038127249.1  protein kinase C-binding protein 1-like isoform X6

      Conserved Domains (7) summary
      cd05841
      Location:275 → 355
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:157 → 255
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:7 → 139
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:96 → 136
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1039 → 1073
      zf-MYND; MYND finger
      pfam07798
      Location:944 → 1035
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:424 → 621
      DUF3544; Domain of unknown function (DUF3544)

    13. XM_038271315.1 → XP_038127243.1  protein kinase C-binding protein 1-like isoform X1

      Conserved Domains (7) summary
      cd05841
      Location:308 → 388
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:190 → 288
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:14 → 172
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:129 → 169
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1072 → 1106
      zf-MYND; MYND finger
      pfam07798
      Location:977 → 1068
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:457 → 654
      DUF3544; Domain of unknown function (DUF3544)

    14. XM_038271314.1 → XP_038127242.1  protein kinase C-binding protein 1-like isoform X1

      Conserved Domains (7) summary
      cd05841
      Location:308 → 388
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05508
      Location:190 → 288
      Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
      COG5034
      Location:14 → 172
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15538
      Location:129 → 169
      PHD_PRKCBP1; PHD finger found in protein kinase C-binding protein 1 (PRKCBP1)
      pfam01753
      Location:1072 → 1106
      zf-MYND; MYND finger
      pfam07798
      Location:977 → 1068
      DUF1640; Protein of unknown function (DUF1640)
      pfam12064
      Location:457 → 654
      DUF3544; Domain of unknown function (DUF3544)
    Nucleotide Protein
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