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    Socs44A Suppressor of Cytokine Signaling at 44A [ Glossina fuscipes ]

    Gene ID: 119635740, updated on 16-May-2024

    Summary

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    Gene symbol
    Socs44A
    Gene description
    Suppressor of Cytokine Signaling at 44A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glossina fuscipes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Hippoboscoidea; Glossinidae; Glossina
    Orthologs
    fruit fly all
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    Genomic context

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    See Socs44A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Yale_Gfus_2 (GCF_014805625.1) Unplaced Scaffold NW_023998422.1 (5768801..5771197, complement)

    NW_023998422.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 37 Neighboring gene coilin Neighboring gene integral membrane protein GPR180 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene facilitated trehalose transporter Tret1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023998422 Unplaced Scaffold Reference Yale_Gfus_2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-3-kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of phosphatidylinositol 3-kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    suppressor of cytokine signaling 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glossina fuscipes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Yale_Gfus_2

    Genomic

    1. NW_023998422.1 Reference Yale_Gfus_2

      Range
      5768801..5771197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038030733.1 → XP_037886661.1  suppressor of cytokine signaling 4

      UniProtKB/TrEMBL
      A0A9C5YW98
      Conserved Domains (2) summary
      smart00253
      Location:308 → 350
      SOCS; suppressors of cytokine signalling
      cd09923
      Location:203 → 281
      SH2_SOCS_family; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

    2. XM_038030732.1 → XP_037886660.1  suppressor of cytokine signaling 4

      UniProtKB/TrEMBL
      A0A9C5YW98
      Conserved Domains (2) summary
      smart00253
      Location:308 → 350
      SOCS; suppressors of cytokine signalling
      cd09923
      Location:203 → 281
      SH2_SOCS_family; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family
    Nucleotide Protein
    Heading Accession and Version

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