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    LOC6563050 serendipity locus protein alpha [ Drosophila grimshawi ]

    Gene ID: 6563050, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6563050
    Gene description
    serendipity locus protein alpha
    Locus tag
    Dgri_GH19171
    See related
    EnsemblRapid:LOC6563050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila grimshawi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
    Also known as
    GH19171; GH19171-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6563050 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (7013509..7015089, complement)
    102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961675.1 (6126867..6128380)

    NW_025063098.1Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L32 Neighboring gene serendipity locus protein delta Neighboring gene serendipity locus protein beta Neighboring gene sex-regulated protein janus-A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellularization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serendipity locus protein alpha
    Names
    Dgri\GH19171
    Dgri\GH19171-PA
    dgri_GLEANR_3486

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815329v1

    Genomic

    1. NW_025063098.1 Reference ASM1815329v1

      Range
      7013509..7015089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032736978.2 → XP_032592869.1  serendipity locus protein alpha

      UniProtKB/TrEMBL
      B4JER7
      Related
      XP_032592869.1, XM_032736978.2
      Conserved Domains (1) summary
      pfam05482
      Location:1 → 471
      Serendipity_A; Serendipity locus alpha protein (SRY-A)
    Nucleotide Protein
    Heading Accession and Version

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