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    Smox Smad on X [ Drosophila subpulchrella ]

    Gene ID: 119558274, updated on 23-May-2024

    Summary

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    Gene symbol
    Smox
    Gene description
    Smad on X
    See related
    EnsemblRapid:LOC119558274
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila subpulchrella
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Smox in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current RU_Dsub_v1.1 (GCF_014743375.2) X NC_050613.1 (10542488..10547923)

    Chromosome X - NC_050613.1Genomic Context describing neighboring genes Neighboring gene phenylalanine--tRNA ligase alpha subunit Neighboring gene uncharacterized LOC119558276 Neighboring gene zinc finger protein 567 Neighboring gene dynein regulatory complex protein 1 homolog Neighboring gene zinc finger and SCAN domain-containing protein 21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050613.1 Chromosome X Reference RU_Dsub_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables I-SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of heteromeric SMAD protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mothers against decapentaplegic homolog 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila subpulchrella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RU_Dsub_v1.1

    Genomic

    1. NC_050613.1 Reference RU_Dsub_v1.1

      Range
      10542488..10547923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037871647.1 → XP_037727575.1  mothers against decapentaplegic homolog 3

      Related
      XP_037727575.1, XM_037871647.1
      Conserved Domains (2) summary
      cd10488
      Location:7 → 130
      MH1_R-SMAD; N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs
      cd10985
      Location:284 → 474
      MH2_SMAD_2_3; C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3

    2. XM_037871648.1 → XP_037727576.1  mothers against decapentaplegic homolog 3

      Related
      XP_037727576.1, XM_037871648.1
      Conserved Domains (2) summary
      cd10488
      Location:7 → 130
      MH1_R-SMAD; N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs
      cd10985
      Location:284 → 474
      MH2_SMAD_2_3; C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3
    Nucleotide Protein Strain
    Heading Accession and Version

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