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    micu1 mitochondrial calcium uptake 1 [ Pungitius pungitius (ninespine stickleback) ]

    Gene ID: 119214248, updated on 21-Mar-2024

    Summary

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    Gene symbol
    micu1
    Gene description
    mitochondrial calcium uptake 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pungitius pungitius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
    Orthologs
    human zebrafish all
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    Genomic context

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    See micu1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 13 NC_084912.1 (11494046..11517874)
    100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616460.1 (11532504..11556316)

    Chromosome 13 - NC_084912.1Genomic Context describing neighboring genes Neighboring gene oncoprotein induced transcript 3 Neighboring gene mitochondrial calcium uniporter Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene mitochondrial ribosomal protein S6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium import into the mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of uniplex complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium uptake protein 1, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPunPun2.1

    Genomic

    1. NC_084912.1 Reference fPunPun2.1

      Range
      11494046..11517874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037465896.2 → XP_037321793.1  calcium uptake protein 1, mitochondrial isoform X1

      Conserved Domains (2) summary
      cd15900
      Location:235 → 264
      EFh_MICU; EF-hand motif [structural motif]
      cl28896
      Location:235 → 455
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins

    2. XM_037465899.2 → XP_037321796.1  calcium uptake protein 1, mitochondrial isoform X2

      Conserved Domains (2) summary
      cd15900
      Location:231 → 260
      EFh_MICU; EF-hand motif [structural motif]
      cl28896
      Location:231 → 451
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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