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    COBL cordon-bleu WH2 repeat protein [ Falco rusticolus (gyrfalcon) ]

    Gene ID: 119144243, updated on 3-Aug-2024

    Summary

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    Gene symbol
    COBL
    Gene description
    cordon-bleu WH2 repeat protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco rusticolus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
    Orthologs
    human mouse all
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    Genomic context

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    See COBL in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current bFalRus1.pri (GCF_015220075.1) 3 NC_051189.1 (79465957..79672415)

    Chromosome 3 - NC_051189.1Genomic Context describing neighboring genes Neighboring gene formin homology 2 domain containing 3 Neighboring gene V-set and transmembrane domain containing 2A Neighboring gene uncharacterized LOC119144491 Neighboring gene uncharacterized LOC119144493 Neighboring gene growth factor receptor bound protein 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051189.1 Chromosome 3 Reference bFalRus1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin monomer binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axonal growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ruffle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal web IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein cordon-bleu

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Falco rusticolus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalRus1.pri Primary Assembly

    Genomic

    1. NC_051189.1 Reference bFalRus1.pri Primary Assembly

      Range
      79465957..79672415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037379292.1 → XP_037235189.1  protein cordon-bleu isoform X4

      Conserved Domains (4) summary
      pfam09469
      Location:137 → 213
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1238 → 1270
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1284 → 1327
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1368 → 1393
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    2. XM_037379290.1 → XP_037235187.1  protein cordon-bleu isoform X2

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1254 → 1286
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1300 → 1343
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1384 → 1409
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    3. XM_037379291.1 → XP_037235188.1  protein cordon-bleu isoform X3

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1240 → 1272
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1286 → 1329
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1370 → 1395
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    4. XM_037379289.1 → XP_037235186.1  protein cordon-bleu isoform X1

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1255 → 1287
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1301 → 1344
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1385 → 1410
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    5. XM_037379294.1 → XP_037235191.1  protein cordon-bleu isoform X5

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1228 → 1260
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1274 → 1317
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1358 → 1383
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    6. XM_037379296.1 → XP_037235193.1  protein cordon-bleu isoform X6

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1213 → 1245
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1259 → 1302
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1343 → 1368
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    7. XM_037379297.1 → XP_037235194.1  protein cordon-bleu isoform X7

      Conserved Domains (4) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1198 → 1230
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1244 → 1287
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1328 → 1353
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    8. XM_037379293.1 → XP_037235190.1  protein cordon-bleu isoform X4

      Conserved Domains (4) summary
      pfam09469
      Location:137 → 213
      Cobl; Cordon-bleu ubiquitin-like domain
      cd21799
      Location:1238 → 1270
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1284 → 1327
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1368 → 1393
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins

    9. XM_037379298.1 → XP_037235195.1  protein cordon-bleu isoform X8

      Conserved Domains (3) summary
      cd21799
      Location:1028 → 1060
      WH2_Wa_Cobl; first Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wa) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21800
      Location:1074 → 1117
      WH2_Wb_Cobl; second Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wb) found in protein Cordon-Bleu (Cobl) and similar proteins
      cd21801
      Location:1158 → 1183
      WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins
    Nucleotide Protein
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