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    TFAP2B transcription factor AP-2 beta [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

    Gene ID: 119053617, updated on 30-Mar-2024

    Summary

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    Gene symbol
    TFAP2B
    Gene description
    transcription factor AP-2 beta
    See related
    EnsemblRapid:ENSAJMG00005024174
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Artibeus jamaicensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
    Orthologs
    human mouse all
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    Genomic context

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    See TFAP2B in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521859.1 (4868886..4897984, complement)

    NW_026521859.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene 40S ribosomal protein S16-like Neighboring gene transcription factor AP-2 delta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026521859 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor AP-2-beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSHL_Jam_final Primary Assembly

    Genomic

    1. NW_026521859.1 Reference CSHL_Jam_final Primary Assembly

      Range
      4868886..4897984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037151257.2 → XP_037007152.1  transcription factor AP-2-beta isoform X6

      Conserved Domains (1) summary
      pfam03299
      Location:230 → 424
      TF_AP-2; Transcription factor AP-2

    2. XM_037151252.2 → XP_037007147.1  transcription factor AP-2-beta isoform X1

      Conserved Domains (1) summary
      pfam03299
      Location:239 → 433
      TF_AP-2; Transcription factor AP-2

    3. XM_037151255.2 → XP_037007150.1  transcription factor AP-2-beta isoform X4

      Conserved Domains (1) summary
      pfam03299
      Location:239 → 433
      TF_AP-2; Transcription factor AP-2

    4. XM_037151254.2 → XP_037007149.1  transcription factor AP-2-beta isoform X3

      Conserved Domains (1) summary
      pfam03299
      Location:230 → 424
      TF_AP-2; Transcription factor AP-2

    5. XM_037151256.2 → XP_037007151.1  transcription factor AP-2-beta isoform X5

      Related
      ENSAJMP00005035032.1
      Conserved Domains (1) summary
      pfam03299
      Location:230 → 424
      TF_AP-2; Transcription factor AP-2

    6. XM_037151253.2 → XP_037007148.1  transcription factor AP-2-beta isoform X2

      Conserved Domains (1) summary
      pfam03299
      Location:239 → 433
      TF_AP-2; Transcription factor AP-2

    7. XM_037151258.2 → XP_037007153.1  transcription factor AP-2-beta isoform X7

      Conserved Domains (1) summary
      pfam03299
      Location:212 → 406
      TF_AP-2; Transcription factor AP-2
    Nucleotide Protein
    Heading Accession and Version

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