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    ATRNL1 attractin like 1 [ Rousettus aegyptiacus (Egyptian rousette) ]

    Gene ID: 107511724, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ATRNL1
    Gene description
    attractin like 1
    Locus tag
    HJG63_001257
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rousettus aegyptiacus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
    Orthologs
    human mouse all
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    Genomic context

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    See ATRNL1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416309.1 (49924773..50460651)
    100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494432.1 (1927826..2171016)

    NW_023416309.1Genomic Context describing neighboring genes Neighboring gene bile salt sulfotransferase-like Neighboring gene uncharacterized LOC118603788 Neighboring gene uncharacterized LOC118603789 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene GDNF family receptor alpha 1 Neighboring gene 5S ribosomal RNA Neighboring gene coiled-coil domain containing 172

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    attractin-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRouAeg1.p

    Genomic

    1. NW_023416309.1 Reference mRouAeg1.p

      Range
      49924773..50460651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036222140.1 → XP_036078033.1  attractin-like protein 1 isoform X2

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    2. XM_036222145.1 → XP_036078038.1  attractin-like protein 1 isoform X6

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    3. XM_036222143.1 → XP_036078036.1  attractin-like protein 1 isoform X4

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    4. XM_036222144.1 → XP_036078037.1  attractin-like protein 1 isoform X5

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    5. XM_036222139.1 → XP_036078032.1  attractin-like protein 1 isoform X1

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    6. XM_036222142.1 → XP_036078035.1  attractin-like protein 1 isoform X3

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    7. XM_036222146.1 → XP_036078039.1  attractin-like protein 1 isoform X7

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    8. XM_036222147.1 → XP_036078040.1  attractin-like protein 1 isoform X8

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    9. XM_036222149.1 → XP_036078042.1  attractin-like protein 1 isoform X10

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    10. XM_036222148.1 → XP_036078041.1  attractin-like protein 1 isoform X9

      Conserved Domains (9) summary
      cd03597
      Location:920 → 1046
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:485 → 782
      PHA03098; kelch-like protein; Provisional
      PHA03247
      Location:86 → 266
      PHA03247; large tegument protein UL36; Provisional
      cd00041
      Location:272 → 380
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1185 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:693 → 746
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:1061 → 1110
      PSI; Plexin repeat
      pfam13854
      Location:524 → 564
      Kelch_5; Kelch motif
      cl19567
      Location:407 → 452
      DSL; Delta serrate ligand

    11. XM_036222152.1 → XP_036078045.1  attractin-like protein 1 isoform X13

      UniProtKB/TrEMBL
      A0A7J8G4F3
      Conserved Domains (9) summary
      cd03597
      Location:753 → 879
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PLN02153
      Location:459 → 605
      PLN02153; epithiospecifier protein
      PLN02193
      Location:305 → 392
      PLN02193; nitrile-specifier protein
      cd00041
      Location:98 → 213
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1018 → 1063
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:526 → 579
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:894 → 943
      PSI; Plexin repeat
      pfam13854
      Location:357 → 397
      Kelch_5; Kelch motif
      cl19567
      Location:240 → 285
      DSL; Delta serrate ligand

    12. XM_036222151.1 → XP_036078044.1  attractin-like protein 1 isoform X12

      Conserved Domains (9) summary
      cd03597
      Location:753 → 879
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PLN02153
      Location:459 → 605
      PLN02153; epithiospecifier protein
      PLN02193
      Location:305 → 392
      PLN02193; nitrile-specifier protein
      cd00041
      Location:98 → 213
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1018 → 1063
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:526 → 579
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:894 → 943
      PSI; Plexin repeat
      pfam13854
      Location:357 → 397
      Kelch_5; Kelch motif
      cl19567
      Location:240 → 285
      DSL; Delta serrate ligand

    13. XM_036222150.1 → XP_036078043.1  attractin-like protein 1 isoform X11

      Conserved Domains (9) summary
      cd03597
      Location:753 → 879
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PLN02153
      Location:459 → 605
      PLN02153; epithiospecifier protein
      PLN02193
      Location:305 → 392
      PLN02193; nitrile-specifier protein
      cd00041
      Location:98 → 213
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1018 → 1063
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:526 → 579
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:894 → 943
      PSI; Plexin repeat
      pfam13854
      Location:357 → 397
      Kelch_5; Kelch motif
      cl19567
      Location:240 → 285
      DSL; Delta serrate ligand

    RNA

    1. XR_004951254.1 RNA Sequence

    2. XR_004951255.1 RNA Sequence

    3. XR_004951256.1 RNA Sequence

    4. XR_004951257.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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