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    TRIADDRAFT_54719 uncharacterized protein [ Trichoplax adhaerens ]

    Gene ID: 6751789, updated on 17-Feb-2024

    Summary

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    Gene symbol
    TRIADDRAFT_54719
    Gene description
    uncharacterized protein
    Locus tag
    TRIADDRAFT_54719
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichoplax adhaerens (strain: Grell-BS-1999)
    Lineage
    Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax
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    Genomic context

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    See TRIADDRAFT_54719 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    30

    NW_002060945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002060945.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Trichoplax genome and the nature of placozoans. Srivastava M, et al. Nature, 2008 Aug 21. PMID 18719581
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_002111096.1
    • similar to Human Rhoa In Complex With DhPH Fragment Of Pdzrhogef

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002060945.1 Reference assembly

      Range
      6603361..6612061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002111060.1 → XP_002111096.1  uncharacterized protein TRIADDRAFT_54719 [Trichoplax adhaerens]

      See identical proteins and their annotated locations for XP_002111096.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B3RST2
      Conserved Domains (4) summary
      cd00029
      Location:301 → 351
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd00992
      Location:18 → 93
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam00621
      Location:492 → 674
      RhoGEF; RhoGEF domain
      cl02565
      Location:114 → 219
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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