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    PROPEP4 elicitor peptide 4 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830859, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PROPEP4
    Official Full Name
    elicitor peptide 4 precursor
    Primary source
    TAIR:AT5G09980
    Locus tag
    AT5G09980
    See related
    Araport:AT5G09980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    elicitor peptide 4 precursor; MYH9.20; MYH9_20
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    Genomic context

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    See PROPEP4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (3122731..3124003)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene elicitor peptide 7 precursor Neighboring gene elicitor peptide 5 precursor Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An endogenous peptide signal in Arabidopsis activates components of the innate immune response. Huffaker A, et al. Proc Natl Acad Sci U S A, 2006 Jun 27. PMID 16785434, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_121035.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    elicitor peptide 4 precursor
    NP_568223.1
    • elicitor peptide 4 precursor (PROPEP4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to jasmonic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3122731..3124003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121035.4 → NP_568223.1  elicitor peptide 4 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568223.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9J1, Q9FIA9
      UniProtKB/TrEMBL
      A0A178UAH4, A0A5S9Y362
      Conserved Domains (1) summary
      pfam17232
      Location:2 → 73
      DUF5306; Family of unknown function (DUF5306)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIA9.1

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