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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823640, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G45050
    Locus tag
    AT3G45050
    See related
    Araport:AT3G45050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (16475957..16477524)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S10p/S20e family protein Neighboring gene phosphatidate cytidylyltransferase family protein Neighboring gene high affinity nitrate transporter 2.6 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_114374.4
    NM_180325.2
    NM_180326.3
    NM_202657.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_190091.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_850656.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_850657.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_974386.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16475957..16477524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180326.3 → NP_850657.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850657.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
      Conserved Domains (1) summary
      COG1107
      Location:83 → 155
      COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

    2. NM_202657.3 → NP_974386.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974386.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
      Conserved Domains (1) summary
      COG1107
      Location:83 → 155
      COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

    3. NM_114374.4 → NP_190091.2  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190091.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
      Conserved Domains (1) summary
      COG1107
      Location:83 → 155
      COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

    4. NM_180325.2 → NP_850656.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850656.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8GWW5
    Nucleotide Protein
    Heading Accession and Version

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