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    NFE2L1 NFE2 like bZIP transcription factor 1 [ Halichoerus grypus (gray seal) ]

    Gene ID: 118526249, updated on 20-Mar-2024

    Summary

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    Gene symbol
    NFE2L1
    Gene description
    NFE2 like bZIP transcription factor 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Halichoerus grypus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Halichoerus
    Orthologs
    human mouse all
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    Genomic context

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    See NFE2L1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Tufts_HGry_1.1 (GCF_012393455.1) Unplaced Scaffold NW_023402506.1 (254627..270238, complement)

    NW_023402506.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118526255 Neighboring gene sorting nexin 11 Neighboring gene chromobox 1 Neighboring gene uncharacterized LOC118526254 Neighboring gene COPI coat complex subunit zeta 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023402506 Unplaced Scaffold Reference Tufts_HGry_1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoplasmic reticulum membrane sensor NFE2L1
    Names
    nuclear factor, erythroid 2 like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Halichoerus grypus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tufts_HGry_1.1

    Genomic

    1. NW_023402506.1 Reference Tufts_HGry_1.1

      Range
      254627..270238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036077384.1 → XP_035933277.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X1

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    2. XM_036077390.1 → XP_035933283.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X7

      Conserved Domains (1) summary
      cd14720
      Location:616 → 683
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    3. XM_036077386.1 → XP_035933279.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X3

      Conserved Domains (1) summary
      cd14720
      Location:646 → 713
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    4. XM_036077388.1 → XP_035933281.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X5

      Conserved Domains (1) summary
      cd14720
      Location:627 → 694
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    5. XM_036077379.1 → XP_035933272.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X1

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    6. XM_036077381.1 → XP_035933274.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X1

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    7. XM_036077380.1 → XP_035933273.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X1

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    8. XM_036077383.1 → XP_035933276.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X1

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    9. XM_036077391.1 → XP_035933284.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X8

      Conserved Domains (1) summary
      cd14720
      Location:531 → 598
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    10. XM_036077385.1 → XP_035933278.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X2

      Conserved Domains (1) summary
      cd14720
      Location:657 → 724
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    11. XM_036077387.1 → XP_035933280.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X4

      Conserved Domains (1) summary
      cd14720
      Location:646 → 713
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

    12. XM_036077389.1 → XP_035933282.1  endoplasmic reticulum membrane sensor NFE2L1 isoform X6

      Conserved Domains (1) summary
      cd14720
      Location:627 → 694
      bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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