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    LOC101859998 protein piccolo-like [ Aplysia californica (California sea hare) ]

    Gene ID: 101859998, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101859998
    Gene description
    protein piccolo-like
    See related
    EnsemblRapid:LOC101859998
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aplysia californica
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Tectipleura; Aplysiida; Aplysioidea; Aplysiidae; Aplysia
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    Genomic context

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    See LOC101859998 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current AplCal3.0 (GCF_000002075.1) Unplaced Scaffold NW_004797304.1 (1187646..1320939, complement)

    NW_004797304.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101859762 Neighboring gene activating signal cointegrator 1 complex subunit 2 homolog Neighboring gene uncharacterized LOC106014198 Neighboring gene serum paraoxonase/arylesterase 2 Neighboring gene serum paraoxonase/lactonase 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004797304 Unplaced Scaffold Reference AplCal3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of synaptic plasticity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein piccolo-like; uncharacterized protein LOC101859998

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aplysia californica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AplCal3.0 Primary Assembly

    Genomic

    1. NW_004797304.1 Reference AplCal3.0 Primary Assembly

      Range
      1187646..1320939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035973840.1 → XP_035829733.1  uncharacterized protein LOC101859998 isoform X1

      Related
      XP_035829733.1, XM_035973840.1
      Conserved Domains (2) summary
      cd15751
      Location:360 → 422
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl22851
      Location:303 → 431
      PHD_SF; PHD finger superfamily

    2. XM_035973842.1 → XP_035829735.1  protein piccolo-like isoform X2

      Related
      XP_035829735.1, XM_035973842.1
      Conserved Domains (2) summary
      cd15751
      Location:284 → 346
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl22851
      Location:227 → 355
      PHD_SF; PHD finger superfamily

    3. XM_035973844.1 → XP_035829737.1  protein piccolo-like isoform X2

      Related
      XP_035829737.1, XM_035973844.1
      Conserved Domains (2) summary
      cd15751
      Location:284 → 346
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl22851
      Location:227 → 355
      PHD_SF; PHD finger superfamily

    4. XM_035973843.1 → XP_035829736.1  protein piccolo-like isoform X2

      Related
      XP_035829736.1, XM_035973843.1
      Conserved Domains (2) summary
      cd15751
      Location:284 → 346
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl22851
      Location:227 → 355
      PHD_SF; PHD finger superfamily

    5. XM_035973841.1 → XP_035829734.1  protein piccolo-like isoform X2

      Related
      XP_035829734.1, XM_035973841.1
      Conserved Domains (2) summary
      cd15751
      Location:284 → 346
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl22851
      Location:227 → 355
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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