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    Cad96Ca tyrosine kinase receptor Cad96Ca [ Spodoptera frugiperda (fall armyworm) ]

    Gene ID: 118268228, updated on 24-May-2024

    Summary

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    Gene symbol
    Cad96Ca
    Gene description
    tyrosine kinase receptor Cad96Ca
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Spodoptera frugiperda
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Amphipyrinae; Spodoptera
    Orthologs
    fruit fly all
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    Genomic context

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    See Cad96Ca in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current AGI-APGP_CSIRO_Sfru_2.0 (GCF_023101765.2) 29 NC_064240.1 (10840765..10957232)
    101 previous assembly ZJU_Sfru_1.0 (GCF_011064685.1) 11 NC_049720.1 (3223274..3351612, complement)

    Chromosome 29 - NC_064240.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118268671 Neighboring gene tachykinin-like peptides receptor 86C Neighboring gene uncharacterized LOC118268540 Neighboring gene carbonic anhydrase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine kinase receptor Cad96Ca

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Spodoptera frugiperda Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AGI-APGP_CSIRO_Sfru_2.0 Primary Assembly

    Genomic

    1. NC_064240.1 Reference AGI-APGP_CSIRO_Sfru_2.0 Primary Assembly

      Range
      10840765..10957232
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035582621.2 → XP_035438514.1  tyrosine kinase receptor Cad96Ca

      UniProtKB/TrEMBL
      A0A9R0D392
      Conserved Domains (2) summary
      cd11304
      Location:37 → 116
      Cadherin_repeat; Cadherin tandem repeat domain
      cd00192
      Location:312 → 579
      PTKc; Catalytic domain of Protein Tyrosine Kinases

    2. XM_035582620.2 → XP_035438513.1  tyrosine kinase receptor Cad96Ca

      UniProtKB/TrEMBL
      A0A9R0D392
      Conserved Domains (2) summary
      cd11304
      Location:37 → 116
      Cadherin_repeat; Cadherin tandem repeat domain
      cd00192
      Location:312 → 579
      PTKc; Catalytic domain of Protein Tyrosine Kinases
    Nucleotide Protein
    Heading Accession and Version

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