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    SH3 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827531, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SH3 domain-containing protein
    Primary source
    TAIR:AT4G18060
    Locus tag
    AT4G18060
    See related
    Araport:AT4G18060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15J5.30; F15J5_30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (10026650..10030033, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene P-glycoprotein 9 Neighboring gene suppressor Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. FYVE1 is essential for vacuole biogenesis and intracellular trafficking in Arabidopsis. Kolb C, et al. Plant Physiol, 2015 Apr. PMID 25699591, Free PMC Article
    2. Regulation of ADL6 activity by its associated molecular network. Lam BC, et al. Plant J, 2002 Sep. PMID 12207647
    3. SH3 Domain-Containing Protein 2 Plays a Crucial Role at the Step of Membrane Tubulation during Cell Plate Formation. Ahn G, et al. Plant Cell, 2017 Jun. PMID 28584166, Free PMC Article
    4. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
    5. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_117916.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    SH3 domain-containing protein
    NP_193540.3
    • SH3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Neutrophil cytosol factor 2 p67phox (InterPro:IPR000108), Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G34660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10026650..10030033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117916.6 → NP_193540.3  SH3 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193540.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7W0, Q8W5A0, Q9SVW5
      UniProtKB/TrEMBL
      A0A178V6H0, A0A5S9XTL8
      Conserved Domains (2) summary
      cl12013
      Location:49 → 257
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl17036
      Location:285 → 337
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7W0.1

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