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    Socs44A Suppressor of Cytokine Signaling at 44A [ Drosophila subobscura ]

    Gene ID: 117892720, updated on 16-May-2024

    Summary

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    Gene symbol
    Socs44A
    Gene description
    Suppressor of Cytokine Signaling at 44A
    See related
    EnsemblRapid:LOC117892720
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila subobscura
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Socs44A in Genome Data Viewer
    Location:
    chromosome: E
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current UCBerk_Dsub_1.0 (GCF_008121235.1) E NC_048531.1 (5776095..5778033)

    Chromosome E - NC_048531.1Genomic Context describing neighboring genes Neighboring gene ArfGAP domain of ASAP Neighboring gene nuclear pore complex protein Nup50 Neighboring gene uncharacterized LOC117892726 Neighboring gene proximal sequence element A Pbp49 Neighboring gene poly(A) binding protein nuclear 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048531.1 Chromosome E Reference UCBerk_Dsub_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-3-kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of phosphatidylinositol 3-kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC117892720

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila subobscura Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCBerk_Dsub_1.0 Primary Assembly

    Genomic

    1. NC_048531.1 Reference UCBerk_Dsub_1.0 Primary Assembly

      Range
      5776095..5778033
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034799139.1 → XP_034655030.1  uncharacterized protein LOC117892720

      Related
      XP_034655030.1, XM_034799139.1
      Conserved Domains (2) summary
      smart00253
      Location:298 → 338
      SOCS; suppressors of cytokine signalling
      cd09923
      Location:193 → 271
      SH2_SOCS_family; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family
    Nucleotide Protein
    Heading Accession and Version

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