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    RPS19 ribosomal protein S19 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834779, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RPS19
    Official Full Name
    ribosomal protein S19
    Primary source
    TAIR:AT5G47320
    Locus tag
    AT5G47320
    See related
    Araport:AT5G47320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQL5.18; MQL5_18; ribosomal protein S19
    Summary
    Nuclear encoded mitochondrial ribosome subunit.
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    Genomic context

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    See RPS19 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (19203052..19205285)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene PPPDE putative thiol peptidase family protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transfer of rps19 to the nucleus involves the gain of an RNP-binding motif which may functionally replace RPS13 in Arabidopsis mitochondria. Sánchez H, et al. EMBO J, 1996 May 1. PMID 8641279, Free PMC Article
    2. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_124103.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    part_of mitochondrial small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein S19
    NP_568681.1
    • ribosomal protein S19 (RPS19); CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19203052..19205285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124103.4 → NP_568681.1  ribosomal protein S19 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568681.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P39697, Q41991, Q94AL0, Q9LVS7
      UniProtKB/TrEMBL
      A0A178UHZ5, A0A5S9YBZ1, A0A7G2FI75
      Conserved Domains (2) summary
      PLN03134
      Location:1 → 116
      PLN03134; glycine-rich RNA-binding protein 4; Provisional
      cl00350
      Location:134 → 210
      Ribosomal_S19; Ribosomal protein S19
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P39697.2

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