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    ptprh protein tyrosine phosphatase receptor type H [ Pangasianodon hypophthalmus (striped catfish) ]

    Gene ID: 113532648, updated on 15-Mar-2024

    Summary

    Gene symbol
    ptprh
    Gene description
    protein tyrosine phosphatase receptor type H
    Locus tag
    PHYPO_G00127310
    See related
    EnsemblRapid:ENSPHYG00025005203
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pangasianodon hypophthalmus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
    Orthologs
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    Genomic context

    See ptprh in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 22 NC_069731.1 (8989233..9041992)

    Chromosome 22 - NC_069731.1Genomic Context describing neighboring genes Neighboring gene caveolae associated protein 1b Neighboring gene ATPase H+ transporting V0 subunit a1b Neighboring gene putative nuclease HARBI1 Neighboring gene uncharacterized LOC113532651 Neighboring gene bone morphogenetic protein 6

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_069731.1 Chromosome 22 Reference fPanHyp1.pri

    General protein information

    Preferred Names
    receptor-type tyrosine-protein phosphatase H

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPanHyp1.pri

    Genomic

    1. NC_069731.1 Reference fPanHyp1.pri

      Range
      8989233..9041992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034297944.2XP_034153835.1  receptor-type tyrosine-protein phosphatase H isoform X1

      UniProtKB/TrEMBL
      A0A5N5KS03
      Related
      ENSPHYP00025010702.1, ENSPHYT00025012000.1
      Conserved Domains (3) summary
      smart00060
      Location:398475
      FN3; Fibronectin type 3 domain
      smart00194
      Location:638897
      PTPc; Protein tyrosine phosphatase, catalytic domain
      pfam00041
      Location:52117
      fn3; Fibronectin type III domain
    2. XM_034297945.2XP_034153836.1  receptor-type tyrosine-protein phosphatase H isoform X2

      Conserved Domains (3) summary
      smart00060
      Location:398475
      FN3; Fibronectin type 3 domain
      smart00194
      Location:637896
      PTPc; Protein tyrosine phosphatase, catalytic domain
      pfam00041
      Location:52117
      fn3; Fibronectin type III domain
    3. XM_053227995.1XP_053083970.1  receptor-type tyrosine-protein phosphatase H isoform X3

    4. XM_053227996.1XP_053083971.1  receptor-type tyrosine-protein phosphatase H isoform X4

    RNA

    1. XR_008300748.1 RNA Sequence