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    NLP1 nitrilase-like protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817290, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NLP1
    Official Full Name
    nitrilase-like protein 1
    Primary source
    TAIR:AT2G27450
    Locus tag
    AT2G27450
    See related
    Araport:AT2G27450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNLP1; CPA; F10A12.13; F10A12_13; N-CARBAMOYLPUTRESCINE AMIDOHYDROLASE; nitrilase-like protein 1
    Summary
    Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.
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    Genomic context

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    See NLP1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (11737374..11739690, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene miscRNA Neighboring gene sec23/sec24 transport family protein Neighboring gene nuclear factor Y, subunit B11 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant C-N hydrolases and the identification of a plant N-carbamoylputrescine amidohydrolase involved in polyamine biosynthesis. Piotrowski M, et al. J Biol Chem, 2003 Jan 17. PMID 12435743
    2. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article
    3. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128305.2
    NM_179770.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N-carbamoylputrescine amidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within putrescine biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in putrescine biosynthetic process from arginine IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nitrilase-like protein 1
    NP_565650.1
    • nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 12192 Blast hits to 12142 proteins in 2277 species: Archae - 244; Bacteria - 8385; Metazoa - 492; Fungi - 451; Plants - 313; Viruses - 11; Other Eukaryotes - 2296 (source: NCBI BLink).
    NP_850101.1
    • nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 11784 Blast hits to 11734 proteins in 2281 species: Archae - 221; Bacteria - 8133; Metazoa - 478; Fungi - 416; Plants - 310; Viruses - 11; Other Eukaryotes - 2215 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11737374..11739690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336116.1 → NP_001324215.1  nitrilase-like protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZH4

    2. NM_179770.1 → NP_850101.1  nitrilase-like protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850101.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X1Q5
      Conserved Domains (1) summary
      PLN02747
      Location:4 → 326
      PLN02747; N-carbamolyputrescine amidase

    3. NM_128305.2 → NP_565650.1  nitrilase-like protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565650.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VYF5, Q9ZQH4
      UniProtKB/TrEMBL
      A0A5S9X1Q5, A0A654EWS7, B9DGV9
      Conserved Domains (1) summary
      PLN02747
      Location:4 → 299
      PLN02747; N-carbamolyputrescine amidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VYF5.2

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