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    phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839794, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein
    Primary source
    TAIR:AT1G29195
    Locus tag
    AT1G29195
    See related
    Araport:AT1G29195
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (10202414..10203491, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cysteine/histidine-rich C1 domain protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene miscRNA Neighboring gene tRNA-Glu Neighboring gene O-fucosyltransferase family protein Neighboring gene transcriptional regulator family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Patterns of Sequence and Expression Diversification Associate Members of the PADRE Gene Family With Response to Fungal Pathogens. Didelon M, et al. Front Genet, 2020. PMID 32547597, Free PMC Article
    2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_102660.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to fungus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein
    NP_564323.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10202414..10203491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102660.3 → NP_564323.1  phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564323.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPC0, Q681T1, Q9LP48
      Conserved Domains (1) summary
      pfam14009
      Location:8 → 188
      DUF4228; Domain of unknown function (DUF4228)
    Nucleotide Protein
    Heading Accession and Version

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