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    EHI_052080 uncharacterized protein [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3409542, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_052080
    Gene description
    uncharacterized protein
    Locus tag
    EHI_052080
    See related
    AmoebaDB:EHI_052080; VEuPathDB:EHI_052080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    33.t00047
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    Genomic context

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    See EHI_052080 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001915062.1Genomic Context describing neighboring genes Neighboring gene protein kinase domain containing protein Neighboring gene uncharacterized protein Neighboring gene small nuclear ribonucleoprotein Sm D1, putative Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001915062.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_655233.2
    • encoded by transcript EHI_052080A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001915062.1 Reference assembly

      Range
      8318..9917 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_650141.2 → XP_655233.2  uncharacterized protein EHI_052080 [Entamoeba histolytica HM-1:IMSS]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JVE1, A0A5K1ULF5, C4M849, M2SFV4, M7W181
      Conserved Domains (1) summary
      cd00162
      Location:81 → 126
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    Nucleotide Protein
    Heading Accession and Version

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