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    Mtmr6 Myotubularin related protein 6 [ Drosophila pseudoobscura ]

    Gene ID: 4804487, updated on 23-May-2024

    Summary

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    Gene symbol
    Mtmr6
    Gene description
    Myotubularin related protein 6
    See related
    EnsemblRapid:LOC4804487
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila pseudoobscura
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Mtmr6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (12841612..12848952)

    Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4804484 Neighboring gene uncharacterized LOC4804485 Neighboring gene focadhesin Neighboring gene eukaryotic translation initiation factor 2B subunit delta Neighboring gene reduction of Rh1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
    2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotubularin-related protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCI_Dpse_MV25 Primary Assembly

    Genomic

    1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

      Range
      12841612..12848952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004444159.3 → XP_004444216.3  myotubularin-related protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A6I8V7J3
      Related
      XP_004444216.3, XM_004444159.3
      Conserved Domains (3) summary
      cd13210
      Location:4 → 101
      PH-GRAM_MTMR6-like; Myotubularian (MTM) related (MTMR) 7 and 8 proteins Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15738
      Location:622 → 682
      FYVE_MTMR_unchar; FYVE-related domain found in uncharacterized myotubularin-related proteins mainly from eumetazoa
      cd14532
      Location:130 → 429
      PTP-MTMR6-like; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases 6, 7, and 8

    2. XM_001361006.4 → XP_001361043.2  myotubularin-related protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A6I8UUE2
      Related
      XP_001361043.2, XM_001361006.4
      Conserved Domains (3) summary
      cd13210
      Location:78 → 173
      PH-GRAM_MTMR6-like; Myotubularian (MTM) related (MTMR) 7 and 8 proteins Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15738
      Location:694 → 754
      FYVE_MTMR_unchar; FYVE-related domain found in uncharacterized myotubularin-related proteins mainly from eumetazoa
      cd14532
      Location:202 → 501
      PTP-MTMR6-like; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases 6, 7, and 8
    Nucleotide Protein Strain
    Heading Accession and Version

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