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    PSMA1 proteasome 20S subunit alpha 1 [ Trachypithecus francoisi (Francois's langur) ]

    Gene ID: 117081555, updated on 19-Mar-2024

    Summary

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    Gene symbol
    PSMA1
    Gene description
    proteasome 20S subunit alpha 1
    See related
    EnsemblRapid:ENSTFRG00000020843
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trachypithecus francoisi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
    Orthologs
    human mouse all
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    Genomic context

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    See PSMA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681473.1 (50593636..50609510)

    NW_022681473.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 3B Neighboring gene 60S ribosomal protein L6-like Neighboring gene mortality factor 4-like protein 1 Neighboring gene U7 small nuclear RNA Neighboring gene COPI coat complex subunit beta 1 Neighboring gene 60S ribosomal protein L39-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022681473 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome core complex, alpha-subunit complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit alpha type-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tfra_2.0 Primary Assembly

    Genomic

    1. NW_022681473.1 Reference Tfra_2.0 Primary Assembly

      Range
      50593636..50609510
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033207673.1 → XP_033063564.1  proteasome subunit alpha type-1 isoform X1

      Related
      ENSTFRP00000024348.1, ENSTFRT00000030698.1
      Conserved Domains (1) summary
      cd03749
      Location:6 → 216
      proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

    2. XM_033207675.1 → XP_033063566.1  proteasome subunit alpha type-1 isoform X2

      Conserved Domains (1) summary
      cd03749
      Location:1 → 191
      proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

    3. XM_033207676.1 → XP_033063567.1  proteasome subunit alpha type-1 isoform X2

      Related
      ENSTFRP00000024333.1, ENSTFRT00000030678.1
      Conserved Domains (1) summary
      cd03749
      Location:1 → 191
      proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
    Nucleotide Protein
    Heading Accession and Version

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